Commands

Global flags

These flags apply to all md commands:

Flag	Description
--runtime <runtime>	Select container runtime: docker or podman (default: auto-detect)
--control-master	Enable SSH ControlMaster connection multiplexing (disabled on Windows)
-v, --verbose	Verbose output

Container lifecycle

Command	Description
md start	Create and start a container for the current branch; SSH in automatically
md start -display	Start with X11/VNC desktop environment
md start -tailscale	Start with Tailscale networking
md start -usb	Start with USB device passthrough (for ADB, Linux only)
md start -no-ssh	Start container without opening an SSH session
md run <cmd>	Start a temporary container, run a command, then clean up
md fork	Snapshot a running container and create a new one on fresh branches
md list	List all md containers
md list --json	List containers as JSON
md list --stats	Include resource usage stats (CPU, memory, disk, network)
md sudo-password	Print the container's random sudo password
md stop	Stop the container (preserves filesystem for later revival)
md start (on stopped container)	Revive a stopped container (re-queries SSH port, restores SSH config)
md purge	Stop and permanently remove the container

Start flags

Flag	Description
-b, -branch <name>	Branch to use (default: current branch)
-r, -repo <path>	Path to git repository (default: current directory)
--image <ref>	Full base Docker image (e.g. ghcr.io/caic-xyz/md-user:2026-05-09)
--tag <tag>	Tag for the default base image (ghcr.io/caic-xyz/md-user:<tag>)
--display, -d	Enable X11/VNC virtual desktop (port 5901)
--tailscale	Enable Tailscale networking
--usb	Pass through USB devices (/dev/bus/usb, Linux only)
--github	Inject GITHUB_TOKEN into the container
--no-ssh	Don't SSH into the container after starting
--cpus <n>	Max CPU cores (default: NumCPU - 2, minimum 2; 0 = no limit)
--label key=value, -l	Add Docker container label (repeatable)
--extra-repo path[:branch], -e	Map an additional git repository (repeatable)
--docker-flag "arg1 arg2"	Extra flags passed verbatim to docker run (shell-quoted, repeatable)
--sudo	Enable root access with a random password; grants SYS_ADMIN and /dev/fuse
-q, --quiet	Suppress informational output
--control-master	Enable SSH ControlMaster connection multiplexing

Access

Command	Description
ssh md-<repo>-<branch>	SSH into the container directly
md vnc	Open VNC connection to the container desktop

Syncing

Command	Description
md diff	Show changes vs. base branch (git diff base). Extra args forwarded to git, e.g. md diff --stat
md diff --all	Show diffs for all repos in the container
md pull	Pull changes from container and integrate into local branch
md pull --all	Pull changes for all repos
md fetch	Fetch changes from container without integrating (updates remote-tracking ref)
md push	Force-push local state into the container; creates a backup branch inside

Fork

md fork snapshots a running container's entire filesystem (installed packages, build artifacts, agent state) and creates a new container where each repo is checked out on a fresh branch.

# Fork the current container
md fork

# Fork a specific container by name
md fork -source md-myrepo-main

# Fork with extra repos and VNC
md fork -e ../other-project -display

Fork flags mirror md start plus:

Flag	Description
-s, --source <name>	Source container name (default: auto-detect from repo)
--sudo	Enable root access with a random password; grants SYS_ADMIN and /dev/fuse
-q, --quiet	Suppress informational output

Each repo (source and extra) gets a unique destination branch derived from its source branch (e.g. main → main-0, then main-1, etc.).

Run

md run <cmd> starts a temporary container, runs a command, and cleans up everything:

md run -- npm test
md run -- cargo check
md run --image ghcr.io/caic-xyz/md-user:2025-05-09 -- npm ci

Supports: --image, --tag, --repo, --branch, --github, --cpus, --docker-flag, and all cache flags.

Workflows

Multi-repo containers

Map multiple repositories into a single container with --extra-repo:

# Start with main project + dependency
md start -r ~/src/backend -e ~/src/shared-lib

# Specify branches explicitly
md start -b feature-x -e ~/src/shared-lib:feature-x

All repos are cloned into ~/src/<name> inside the container. The first repo is primary; extras are pushed alongside it. md diff, md pull, and md push operate on the repo matching your current directory. Use --all to operate on all repos:

md diff --all      # show diffs for every repo
md pull --all      # pull changes from every repo

Fork workflow

Fork a running agent's container to try a different approach without losing progress:

# Agent is working in md-myrepo-feature-x
# You want to try a different approach:
md fork              # creates md-myrepo-feature-x-0
ssh md-myrepo-feature-x-0
# Work on the fork. If it works out:
md pull              # pull changes back from the fork
md purge             # clean up the fork
# If the original approach was better:
md purge md-myrepo-feature-x-0  # discard the fork

The fork preserves the entire filesystem (installed packages, build artifacts, agent history) so you don't lose context. Each repo gets a unique divergent branch.

CI / one-shot runs

md run starts a container, runs a command, and cleans up. Ideal for CI:

# Run tests in a clean environment
md run -- npm test
md run -- cargo test
md run -- go test ./...

# Run a linter on a specific branch without checking out
md run -b feature-x -- golangci-lint run ./...

# Custom image + specific version
md run --image ghcr.io/caic-xyz/md-user:2026-05-09 -- npm ci && npm test

# Pass through GitHub token for private repos
md run --github -- npm install

AI commit messages

md pull can generate commit messages using an LLM. It analyzes the diff and recent commit history to produce a conventional commit message.

Setup

Set the provider and model via environment variables; the full list of acceptable ASK_PROVIDER values is from genai:

export ASK_PROVIDER=deepseek
export ASK_MODEL=deepseek-v4-flsah

If not set, md auto-discovers available providers on your system. It prefers CLI-based providers in this order: pi, codex, opencode, claudecode, then any others alphabetically. The model defaults to a cheap/fast option.

For large diffs, md uses a progressive reduction pipeline to fit within the LLM's context window. See Design for details.

Build

md build-image

Builds the md-root-local and md-user-local Docker images from the embedded source. Use this when:

• You're contributing changes to the container Dockerfiles or setup scripts
• You want to test a change to the container's preinstalled tools
• You want fully local images without pulling from ghcr.io

md build-image

The first build takes several minutes (two full Docker builds: root image, then user image on top). Subsequent builds are faster thanks to layer caching.

A GITHUB_TOKEN is recommended to avoid rate limits when installing tools like Neovim and rust-analyzer:

export GITHUB_TOKEN=ghp_...
md build-image

Once built, use the local images:

md start -image md-user-local

md prune

Removes unused md-specialized-* and md-fork-* images no longer referenced by any container. Also cleans the Docker build cache.

Cache flags

Flag	Description
--no-cache <name>	Exclude a specific default cache (repeatable)
--no-caches	Disable all default caches
--cache <name>	Add a well-known cache (use with --no-caches) or custom host:container[:ro]

Caches are baked into the image at build time. Only caches whose host directories exist are included; missing directories are silently skipped. The image rebuilds only when the active cache set changes.

Well-known caches

Cache name	Host path	Description
bun	~/.bun/install/cache	Bun package manager
cargo	~/.cargo/registry, ~/.cargo/git	Rust cargo registry and git checkouts
go-mod	~/go/pkg/mod	Go module cache
gradle	~/.gradle/caches, ~/.gradle/wrapper/dists	Gradle caches and wrapper
maven	~/.m2/repository	Maven repository
npm	~/.npm	npm cache
pip	~/.cache/pip	Python pip cache
pnpm	~/.local/share/pnpm/store	pnpm store
uv	~/.cache/uv	UV Python package manager
android-keys	~/.android (shallow)	Android debug keystore and ADB keys

Remote GUI (VNC)

Enable at startup, then open:

md start -display
md vnc

The DISPLAY environment variable is automatically set in SSH sessions, so X11 apps launched from SSH appear on the VNC desktop.

Recommended VNC clients:

• Windows: RealVNC Viewer, TightVNC, UltraVNC
• macOS: Built-in VNC or RealVNC Viewer
• Linux: tigervnc-viewer, vinagre, or vncviewer